Synthesis, characterization, and biological properties of 8-azido- and 8-amino-substituted 2',5'-oligoadenylates

J Med Chem. 2003 Nov 6;46(23):4926-32. doi: 10.1021/jm030035k.

Abstract

A series of 8-azido- and 8-amino-substituted 2',5'-oligoadenylatyes was prepared by a uranyl-ion catalyzed polymerization of the corresponding 8-substituted adenosine phosphorimidazolide. Subsequent 5'-dephosphorylation of the resulting 5'-phosphoryl 2',5'-linked oligomers with alkaline phosphatase gave the corresponding core oligomers. The CD spectra indicated that the 8-aminoadenosine analogue of the 2',5'-linked trimer has an anti-orientation as in naturally occurring 2',5'-oligoadenylates, while 8-azido-substituted 2',5'-oligoadenylates have a syn-orientation. The 8-substituted oligomers showed enhanced resistance against digestion by snake venom phosphodiesterase. The 2',5'-linked 8-azidoadenylate trimer and tetramer displayed strong RNase L binding and activating ability, although the corresponding dimer is devoid of such activities. In contrast, very low or no RNase L binding and activating ability were observed in the 8-aminoadenosine analogue of 2',5'-oligoadenylates. Results indicate that the bulkiness and ionic character of the 8-substituting group have significant effects on the ability of these analogues to bind and activate RNase L. Furthermore, the orientation of the glycosidic base in the 2-5A analogues may change from syn to anti during binding to RNase L. The 8-azidoadenosine analogues of 2-5A will be useful tools in the photoaffinity labeling of RNase L, due to their strong RNase L binding ability. In addition, these 8-azidoadenosine compounds may be considered as candidates for experimental therapeutic agents because they have enhanced stability to enzyme degradation while retaining the ability to activate RNase L.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Adenine Nucleotides / chemical synthesis*
  • Adenine Nucleotides / chemistry
  • Adenine Nucleotides / pharmacology
  • Alkaline Phosphatase / chemistry
  • Amines / chemical synthesis*
  • Amines / chemistry
  • Amines / pharmacology
  • Animals
  • Azides / chemical synthesis*
  • Azides / chemistry
  • Azides / pharmacology
  • Circular Dichroism
  • Drug Stability
  • Endoribonucleases / metabolism
  • Liver / metabolism
  • Mice
  • Molecular Conformation
  • Oligoribonucleotides / chemical synthesis*
  • Oligoribonucleotides / chemistry
  • Oligoribonucleotides / pharmacology
  • Phosphodiesterase I / chemistry
  • Photoaffinity Labels / chemical synthesis*
  • Photoaffinity Labels / chemistry
  • Photoaffinity Labels / pharmacology
  • Protein Binding
  • Snake Venoms / chemistry
  • Structure-Activity Relationship
  • Tissue Extracts / metabolism

Substances

  • Adenine Nucleotides
  • Amines
  • Azides
  • Oligoribonucleotides
  • Photoaffinity Labels
  • Snake Venoms
  • Tissue Extracts
  • 2',5'-oligoadenylate
  • Endoribonucleases
  • 2-5A-dependent ribonuclease
  • Alkaline Phosphatase
  • Phosphodiesterase I
  • phosphodiesterase I, snake venom